Cancer-miRNA
Regulatory Network		 Compendium of
miRNA Target Genes		 Download FIRM Citation

Rna Polymerase Ii Transcriptional Preinitiation Complex Assembly (GO:0051123) Genes Targeted by hsa-mir-548c-3p in MPM Mesothelioma Gordon Cluster 21
Table contains all genes in the MPM Mesothelioma Gordon cluster number 21. If a gene harbors a predicted miRNA binding site by one of the three inference methods it is displayed in the final column: M = Weeder-miRvestigator predicted site, P = PITA predicted site and T = TargetScan predicted site.
Entrez ID Symbol Description hsa-mir-548c-3p GO:0051123
79897 RPP21 ribonuclease P/MRP 21kDa subunit [Source:HGNC Symbol;Acc:21300]
zzz999
23469 PHF3 PHD finger protein 3 [Source:HGNC Symbol;Acc:8921]
T
4548 MTR 5-methyltetrahydrofolate-homocysteine methyltransferase [Source:HGNC Symbol;Acc:7468]
T
54482 CCDC76 coiled-coil domain containing 76 [Source:HGNC Symbol;Acc:25502]
T
79053 ALG8 asparagine-linked glycosylation 8, alpha-1,3-glucosyltransferase homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:23161]
zzz999
84641 HIATL1 hippocampus abundant transcript-like 1 [Source:HGNC Symbol;Acc:23376]
zzz999
4152 MBD1 methyl-CpG binding domain protein 1 [Source:HGNC Symbol;Acc:6916]
T
55812 SPATA7 spermatogenesis associated 7 [Source:HGNC Symbol;Acc:20423]
zzz999
64745 METTL17 methyltransferase like 17 [Source:HGNC Symbol;Acc:19280]
T
23262 PPIP5K2 diphosphoinositol pentakisphosphate kinase 2 [Source:HGNC Symbol;Acc:29035]
T
5000 ORC4 origin recognition complex, subunit 4 [Source:HGNC Symbol;Acc:8490]
T
23518 R3HDM1 R3H domain containing 1 [Source:HGNC Symbol;Acc:9757]
P T
114327 EFHC1 EF-hand domain (C-terminal) containing 1 [Source:HGNC Symbol;Acc:16406]
T
9972 NUP153 nucleoporin 153kDa [Source:HGNC Symbol;Acc:8062]
T
79646 PANK3 pantothenate kinase 3 [Source:HGNC Symbol;Acc:19365]
T
23414 ZFPM2 zinc finger protein, multitype 2 [Source:HGNC Symbol;Acc:16700]
P T
4942 OAT ornithine aminotransferase [Source:HGNC Symbol;Acc:8091]
zzz999
3035 HARS histidyl-tRNA synthetase [Source:HGNC Symbol;Acc:4816]
T
3945 LDHB lactate dehydrogenase B [Source:HGNC Symbol;Acc:6541]
zzz999
80227 PAAF1 proteasomal ATPase-associated factor 1 [Source:HGNC Symbol;Acc:25687]
zzz999
3895 KTN1 kinectin 1 (kinesin receptor) [Source:HGNC Symbol;Acc:6467]
zzz999
10735 STAG2 stromal antigen 2 [Source:HGNC Symbol;Acc:11355]
P T
8766 RAB11A RAB11A, member RAS oncogene family [Source:HGNC Symbol;Acc:9760]
P T
23041 MON2 MON2 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:29177]
T
7019 TFAM transcription factor A, mitochondrial [Source:HGNC Symbol;Acc:11741]
T
55832 CAND1 cullin-associated and neddylation-dissociated 1 [Source:HGNC Symbol;Acc:30688]
P T
Yes
55631 LRRC40 leucine rich repeat containing 40 [Source:HGNC Symbol;Acc:26004]
T
55228 PNMAL1 PNMA-like 1 [Source:HGNC Symbol;Acc:25578]
zzz999
8863 PER3 period homolog 3 (Drosophila) [Source:HGNC Symbol;Acc:8847]
T
6049 RNF6 ring finger protein (C3H2C3 type) 6 [Source:HGNC Symbol;Acc:10069]
zzz999
9202 ZMYM4 zinc finger, MYM-type 4 [Source:HGNC Symbol;Acc:13055]
T
51742 ARID4B AT rich interactive domain 4B (RBP1-like) [Source:HGNC Symbol;Acc:15550]
zzz999
51320 MEX3C mex-3 homolog C (C. elegans) [Source:HGNC Symbol;Acc:28040]
P T
6428 SRSF3 serine/arginine-rich splicing factor 3 [Source:HGNC Symbol;Acc:10785]
P T
6429 SRSF4 serine/arginine-rich splicing factor 4 [Source:HGNC Symbol;Acc:10786]
T
78991 PCYOX1L prenylcysteine oxidase 1 like [Source:HGNC Symbol;Acc:28477]
zzz999
54101 RIPK4 receptor-interacting serine-threonine kinase 4 [Source:HGNC Symbol;Acc:496]
zzz999
7705 ZNF146 zinc finger protein 146 [Source:HGNC Symbol;Acc:12931]
T
1350 COX7C cytochrome c oxidase subunit VIIc [Source:HGNC Symbol;Acc:2292]
zzz999
23266 LPHN2 latrophilin 2 [Source:HGNC Symbol;Acc:18582]
T
64417 C5orf28 chromosome 5 open reading frame 28 [Source:HGNC Symbol;Acc:26139]
T
63917 GALNT11 UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 11 (GalNAc-T11) [Source:HGNC Symbol;Acc:19875]
zzz999
10564 ARFGEF2 ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited) [Source:HGNC Symbol;Acc:15853]
T
11231 SEC63 SEC63 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:21082]
T
292 SLC25A5 solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 5 [Source:HGNC Symbol;Acc:10991]
T
2969 GTF2I general transcription factor IIi [Source:HGNC Symbol;Acc:4659]
T
7311 UBA52 ubiquitin A-52 residue ribosomal protein fusion product 1 [Source:HGNC Symbol;Acc:12458]
T
51186 WBP5 WW domain binding protein 5 [Source:HGNC Symbol;Acc:30084]
P T
23256 SCFD1 sec1 family domain containing 1 [Source:HGNC Symbol;Acc:20726]
T
10923 SUB1 SUB1 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:19985]
zzz999
23548 TTC33 tetratricopeptide repeat domain 33 [Source:HGNC Symbol;Acc:29959]
T
4140 MARK3 MAP/microtubule affinity-regulating kinase 3 [Source:HGNC Symbol;Acc:6897]
zzz999
8813 DPM1 dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit [Source:HGNC Symbol;Acc:3005]
zzz999
9798 KIAA0174 KIAA0174 [Source:HGNC Symbol;Acc:28977]
zzz999
9969 MED13 mediator complex subunit 13 [Source:HGNC Symbol;Acc:22474]
T
11328 FKBP9 FK506 binding protein 9, 63 kDa [Source:HGNC Symbol;Acc:3725]
T
80349 WDR61 WD repeat domain 61 [Source:HGNC Symbol;Acc:30300]
zzz999
79573 TTC13 tetratricopeptide repeat domain 13 [Source:HGNC Symbol;Acc:26204]
T
55186 SLC25A36 solute carrier family 25, member 36 [Source:HGNC Symbol;Acc:25554]
T
26135 SERBP1 SERPINE1 mRNA binding protein 1 [Source:HGNC Symbol;Acc:17860]
T
79657 RPAP3 RNA polymerase II associated protein 3 [Source:HGNC Symbol;Acc:26151]
zzz999
25950 RWDD3 RWD domain containing 3 [Source:HGNC Symbol;Acc:21393]
P T
8886 DDX18 DEAD (Asp-Glu-Ala-Asp) box polypeptide 18 [Source:HGNC Symbol;Acc:2741]
T
5516 PPP2CB protein phosphatase 2, catalytic subunit, beta isozyme [Source:HGNC Symbol;Acc:9300]
T
79017 GGCT gamma-glutamylcyclotransferase [Source:HGNC Symbol;Acc:21705]
T
167227 DCP2 DCP2 decapping enzyme homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:24452]
T
1545 CYP1B1 cytochrome P450, family 1, subfamily B, polypeptide 1 [Source:HGNC Symbol;Acc:2597]
T
9702 CEP57 centrosomal protein 57kDa [Source:HGNC Symbol;Acc:30794]
P T
6047 RNF4 ring finger protein 4 [Source:HGNC Symbol;Acc:10067]
zzz999
144699 FBXL14 F-box and leucine-rich repeat protein 14 [Source:HGNC Symbol;Acc:28624]
zzz999
27335 EIF3K eukaryotic translation initiation factor 3, subunit K [Source:HGNC Symbol;Acc:24656]
zzz999
22872 SEC31A SEC31 homolog A (S. cerevisiae) [Source:HGNC Symbol;Acc:17052]
zzz999
140890 SREK1 splicing regulatory glutamine/lysine-rich protein 1 [Source:HGNC Symbol;Acc:17882]
T
9988 DMTF1 cyclin D binding myb-like transcription factor 1 [Source:HGNC Symbol;Acc:14603]
zzz999
6322 SCML1 sex comb on midleg-like 1 (Drosophila) [Source:HGNC Symbol;Acc:10580]
zzz999
51439 FAM8A1 family with sequence similarity 8, member A1 [Source:HGNC Symbol;Acc:16372]
T
57092 PCNP PEST proteolytic signal containing nuclear protein [Source:HGNC Symbol;Acc:30023]
T
9874 TLK1 tousled-like kinase 1 [Source:HGNC Symbol;Acc:11841]
P T
55172 C14orf104 chromosome 14 open reading frame 104 [Source:HGNC Symbol;Acc:20188]
zzz999
55254 TMEM39A transmembrane protein 39A [Source:HGNC Symbol;Acc:25600]
P T
9685 CLINT1 clathrin interactor 1 [Source:HGNC Symbol;Acc:23186]
P T
2627 GATA6 GATA binding protein 6 [Source:HGNC Symbol;Acc:4174]
T
284565 NBPF15 neuroblastoma breakpoint family, member 15 [Source:HGNC Symbol;Acc:28791]
T
1657 DMXL1 Dmx-like 1 [Source:HGNC Symbol;Acc:2937]
T
10434 LYPLA1 lysophospholipase I [Source:HGNC Symbol;Acc:6737]
T
56984 PSMG2 proteasome (prosome, macropain) assembly chaperone 2 [Source:HGNC Symbol;Acc:24929]
zzz999
2631 GBAS glioblastoma amplified sequence [Source:HGNC Symbol;Acc:4179]
T
4953 ODC1 ornithine decarboxylase 1 [Source:HGNC Symbol;Acc:8109]
P T
55003 PAK1IP1 PAK1 interacting protein 1 [Source:HGNC Symbol;Acc:20882]
T
57122 NUP107 nucleoporin 107kDa [Source:HGNC Symbol;Acc:29914]
zzz999
51444 RNF138 ring finger protein 138 [Source:HGNC Symbol;Acc:17765]
T
51279 C1RL complement component 1, r subcomponent-like [Source:HGNC Symbol;Acc:21265]
T
28978 TMEM14A transmembrane protein 14A [Source:HGNC Symbol;Acc:21076]
zzz999
10972 TMED10 transmembrane emp24-like trafficking protein 10 (yeast) [Source:HGNC Symbol;Acc:16998]
P T
6432 SRSF7 serine/arginine-rich splicing factor 7 [Source:HGNC Symbol;Acc:10789]
P T
10363 HMG20A high mobility group 20A [Source:HGNC Symbol;Acc:5001]
T
11171 STRAP serine/threonine kinase receptor associated protein [Source:HGNC Symbol;Acc:30796]
P T
5286 PIK3C2A phosphoinositide-3-kinase, class 2, alpha polypeptide [Source:HGNC Symbol;Acc:8971]
P T
9639 ARHGEF10 Rho guanine nucleotide exchange factor (GEF) 10 [Source:HGNC Symbol;Acc:14103]
T
819 CAMLG calcium modulating ligand [Source:HGNC Symbol;Acc:1471]
P T
64848 YTHDC2 YTH domain containing 2 [Source:HGNC Symbol;Acc:24721]
T
56947 MFF mitochondrial fission factor [Source:HGNC Symbol;Acc:24858]
zzz999
387263 C6orf120 chromosome 6 open reading frame 120 [Source:HGNC Symbol;Acc:21247]
zzz999
10140 TOB1 transducer of ERBB2, 1 [Source:HGNC Symbol;Acc:11979]
P T
10054 UBA2 ubiquitin-like modifier activating enzyme 2 [Source:HGNC Symbol;Acc:30661]
T
51002 TPRKB TP53RK binding protein [Source:HGNC Symbol;Acc:24259]
zzz999
11073 TOPBP1 topoisomerase (DNA) II binding protein 1 [Source:HGNC Symbol;Acc:17008]
P T
5018 OXA1L oxidase (cytochrome c) assembly 1-like [Source:HGNC Symbol;Acc:8526]
zzz999
60561 RINT1 RAD50 interactor 1 [Source:HGNC Symbol;Acc:21876]
zzz999
22916 NCBP2 nuclear cap binding protein subunit 2, 20kDa [Source:HGNC Symbol;Acc:7659]
T
29093 MRPL22 mitochondrial ribosomal protein L22 [Source:HGNC Symbol;Acc:14480]
zzz999
7980 TFPI2 tissue factor pathway inhibitor 2 [Source:HGNC Symbol;Acc:11761]
T
10250 SRRM1 serine/arginine repetitive matrix 1 [Source:HGNC Symbol;Acc:16638]
P T
5965 RECQL RecQ protein-like (DNA helicase Q1-like) [Source:HGNC Symbol;Acc:9948]
T
51729 WBP11 WW domain binding protein 11 [Source:HGNC Symbol;Acc:16461]
T
10142 AKAP9 A kinase (PRKA) anchor protein (yotiao) 9 [Source:HGNC Symbol;Acc:379]
zzz999
90 ACVR1 activin A receptor, type I [Source:HGNC Symbol;Acc:171]
T
23142 DCUN1D4 DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae) [Source:HGNC Symbol;Acc:28998]
T
3146 HMGB1 high mobility group box 1 [Source:HGNC Symbol;Acc:4983]
T
Yes
6421 SFPQ splicing factor proline/glutamine-rich [Source:HGNC Symbol;Acc:10774]
zzz999
5879 RAC1 ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1) [Source:HGNC Symbol;Acc:9801]
zzz999
10236 HNRNPR heterogeneous nuclear ribonucleoprotein R [Source:HGNC Symbol;Acc:5047]
zzz999
4191 MDH2 malate dehydrogenase 2, NAD (mitochondrial) [Source:HGNC Symbol;Acc:6971]
zzz999
7267 TTC3 tetratricopeptide repeat domain 3 [Source:HGNC Symbol;Acc:12393]
T
5822 PWP2 PWP2 periodic tryptophan protein homolog (yeast) [Source:HGNC Symbol;Acc:9711]
zzz999
9652 TTC37 tetratricopeptide repeat domain 37 [Source:HGNC Symbol;Acc:23639]
zzz999
7385 UQCRC2 ubiquinol-cytochrome c reductase core protein II [Source:HGNC Symbol;Acc:12586]
zzz999
55914 ERBB2IP erbb2 interacting protein [Source:HGNC Symbol;Acc:15842]
P T
889 KRIT1 KRIT1, ankyrin repeat containing [Source:HGNC Symbol;Acc:1573]
T
5431 POLR2B polymerase (RNA) II (DNA directed) polypeptide B, 140kDa [Source:HGNC Symbol;Acc:9188]
zzz999
60684 C4orf41 chromosome 4 open reading frame 41 [Source:HGNC Symbol;Acc:25751]
zzz999
6879 TAF7 TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 55kDa [Source:HGNC Symbol;Acc:11541]
zzz999
23291 FBXW11 F-box and WD repeat domain containing 11 [Source:HGNC Symbol;Acc:13607]
T
196 AHR aryl hydrocarbon receptor [Source:HGNC Symbol;Acc:348]
P T
Yes
9126 SMC3 structural maintenance of chromosomes 3 [Source:HGNC Symbol;Acc:2468]
zzz999
1487 CTBP1 C-terminal binding protein 1 [Source:HGNC Symbol;Acc:2494]
T
3275 PRMT2 protein arginine methyltransferase 2 [Source:HGNC Symbol;Acc:5186]
T
25847 ANAPC13 anaphase promoting complex subunit 13 [Source:HGNC Symbol;Acc:24540]
zzz999
51441 YTHDF2 YTH domain family, member 2 [Source:HGNC Symbol;Acc:31675]
P T
9039 UBA3 ubiquitin-like modifier activating enzyme 3 [Source:HGNC Symbol;Acc:12470]
T
23173 METAP1 methionyl aminopeptidase 1 [Source:HGNC Symbol;Acc:15789]
T
55164 SHQ1 SHQ1 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:25543]
T
64924 SLC30A5 solute carrier family 30 (zinc transporter), member 5 [Source:HGNC Symbol;Acc:19089]
T
5001 ORC5 origin recognition complex, subunit 5 [Source:HGNC Symbol;Acc:8491]
zzz999
25972 UNC50 unc-50 homolog (C. elegans) [Source:HGNC Symbol;Acc:16046]
zzz999
51012 SLMO2 slowmo homolog 2 (Drosophila) [Source:HGNC Symbol;Acc:15892]
P T
8087 FXR1 fragile X mental retardation, autosomal homolog 1 [Source:HGNC Symbol;Acc:4023]
T
26046 LTN1 listerin E3 ubiquitin protein ligase 1 [Source:HGNC Symbol;Acc:13082]
P T
54832 VPS13C vacuolar protein sorting 13 homolog C (S. cerevisiae) [Source:HGNC Symbol;Acc:23594]
T
5889 RAD51C RAD51 homolog C (S. cerevisiae) [Source:HGNC Symbol;Acc:9820]
zzz999
9440 MED17 mediator complex subunit 17 [Source:HGNC Symbol;Acc:2375]
T
8887 TAX1BP1 Tax1 (human T-cell leukemia virus type I) binding protein 1 [Source:HGNC Symbol;Acc:11575]
T
5921 RASA1 RAS p21 protein activator (GTPase activating protein) 1 [Source:HGNC Symbol;Acc:9871]
zzz999
56257 MEPCE methylphosphate capping enzyme [Source:HGNC Symbol;Acc:20247]
zzz999
51650 MRPS33 mitochondrial ribosomal protein S33 [Source:HGNC Symbol;Acc:16634]
zzz999
440307 TTLL13 tubulin tyrosine ligase-like family, member 13 [Source:HGNC Symbol;Acc:32484]
zzz999
56339 METTL3 methyltransferase like 3 [Source:HGNC Symbol;Acc:17563]
zzz999
10915 TCERG1 transcription elongation regulator 1 [Source:HGNC Symbol;Acc:15630]
P T
1615 DARS aspartyl-tRNA synthetase [Source:HGNC Symbol;Acc:2678]
T
51373 MRPS17 mitochondrial ribosomal protein S17 [Source:HGNC Symbol;Acc:14047]
zzz999
221154 EFHA1 EF-hand domain family, member A1 [Source:HGNC Symbol;Acc:31830]
T
3612 IMPA1 inositol(myo)-1(or 4)-monophosphatase 1 [Source:HGNC Symbol;Acc:6050]
T
4094 MAF v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian) [Source:HGNC Symbol;Acc:6776]
P T

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